Hi, I can only think that you do have it set to delete source files or your software is set to use the files on the destination and not all files are being copied. For example, we don't copy thumbs.db files to the destination as Windows can easily recreate those using the files already there.
You could always export your profile and send us a copy of it. We can then check to see if there's anything obvious in the profile that would cause this:
http://support.2brightsparks.com/
You could always export your profile and send us a copy of it. We can then check to see if there's anything obvious in the profile that would cause this:
http://support.2brightsparks.com/